Posts Tagged ‘skl’

Fast, scalable prediction of deleterious noncoding variants from functional and population genomic data | Nature Genetics

Monday, March 19th, 2018

Fast, scalable prediction of deleterious #noncoding variants from functional & population genomic data LINSIGHT, by @ASiepel et al., combines DNAse & conservation information

Yi-Fei Huang, Brad Gulko & Adam Siepel
Nature Genetics 49, 618–624 (2017)
Published online:
13 March 2017

about the task manager

Friday, September 30th, 2016

todo.txt (
It is simple, light-weight and also has a ios app, which can sync using dropbox.

It is written using pure bash, and the best thing is that you can change the code and customize it if you want. You can also write/use plug-ins, and there are also all kind of community extension for the use on desktop, chrome and so on.

CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription: Cell

Friday, March 4th, 2016

CTCF-Mediated…3D Genome Architecture SNPs give different #chromatin topologies, including strong #allelic effects

Circadian Enhancers Coordinate Multiple Phases of Rhythmic Gene Transcription In Vivo

Sunday, April 5th, 2015

Circadian #Enhancers Coordinate… Rhythmic… Transcription
Periodicity helps find #eRNAs/enhancers & their targets