Posts Tagged ‘allelic’

IHEC Consortium Papers (Cell + other journals)

Monday, November 28th, 2016

#IHECpapers rollout Gr8 work! incl. #privacy, normal breast epigenetics, ETG links, deconvolution, #allelic activity

GERV: a statis,tical method for generative evaluation of regulatory variants for transcription factor binding

Saturday, July 23rd, 2016

GERV: stats method for generative evaluation of regulatory variants
for TF binding Predicts effect of #allelic SNPs

GERV: a statistical method for generative evaluation of regulatory ariants for transcription factor binding

> Haoyang Zeng
> Tatsunori Hashimoto
> Daniel D. Kang
> David K. Gifford

CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription: Cell

Friday, March 4th, 2016

CTCF-Mediated…3D Genome Architecture SNPs give different #chromatin topologies, including strong #allelic effects

Allele-specific expression at single cell resolution

Sunday, January 19th, 2014

We discovered abundant (12 to 24%) monoallelic expression of autosomal genes and that expression of the two alleles occurs independently. The monoallelic expression appeared random and dynamic because there was considerable variation among closely related embryonic cells. Similar patterns of monoallelic expression were observed in mature cells. Our allelic expression analysis also demonstrates the de novo inactivation of the paternal X chromosome.