Posts Tagged ‘brainspan’

Random links related to the PsychENCODE ’18 Rollout

Monday, December 24th, 2018

Cleaning up stuff from the psychENCODE rollout (my tag “pecrollout”)

* Some “liked” tweets (not exhaustive, mostly positive)

https://docs.google.com/spreadsheets/d/e/2PACX-1vRxRW7_Cq4GgacbPjV9f1un3pXZD092p48I04_aaXMMr4o7nbROdFDKxeFkq7BvrdSk1tWd-jrRlnDX/pubhtml

Private archives of the above :
http://meetings.gersteinlab.org/2018/12.23/Tweet-stuff-from-pecrollout-n-rsgdream18/

* Tagged articles

https://linkstream2.gerstein.info/tag/pecrollout/

* Papers

associated with the Gerstein Lab
http://papers.gersteinlab.org/subject/pecrollout

Science magazie collection
http://www.sciencemag.org/collections/psychencode?_ga=2.143857020.873191909.1545622068-923654032.1534125785

PEC website collection
http://www.psychencode.org/?page_id=227

* Yale pre-print site

http://info.gersteinlab.org/PEC_package_preprints

* Random private archived material

https://www.dropbox.com/home/01-NOT-TOP-LEVEL/ARCHIVE/random-archived-materials-from-pecrollout.x57k

Massive analysis refines map of autism’s genetic roots | Spectrum | Autism Research News

Monday, December 24th, 2018

https://www.spectrumnews.org/news/massive-analysis-refines-map-autisms-genetic-roots/

Mapping the Brain’s Genetic Landscape – The New York Times

Tuesday, December 18th, 2018

https://www.nytimes.com/2018/12/13/health/genetics-brain-autism-schizophrenia.html

In the developing brain, scientists find roots of neuropsychiatric diseases | YaleNews

Saturday, December 15th, 2018

https://news.yale.edu/2018/12/13/developing-brain-scientists-find-roots-neuropsychiatric-diseases

yale press release

Genome-wide prediction and functional characterization of the genetic basis of autism spectrum disorder | Nature Neuroscience

Friday, July 27th, 2018

Genome-wide prediction & functional characterization of the genetic basis of autism spectrum disorder, by @OlgaTroyanskaya lab
https://www.Nature.com/articles/nn.4353 Intersected candidate #ASD genes w/ #BrainSpan gene expression to find a pre-natal signal for the disease

Nature 03142018 Single cell rnaseq of development of human brain Pfc

Sunday, March 18th, 2018

https://www.nature.com/articles/nature25980

A single-cell RNA-seq survey of the developmental landscape of the human prefrontal cortex

Suijuan Zhong
, Shu Zhang
[…]
Xiaoqun Wang
Nature
doi:10.1038/nature25980

The Brain That Couldn’t Remember – The New York Times

Monday, March 5th, 2018

The #Brain That Couldn’t Remember
http://www.NYTimes.com/2016/08/07/magazine/the-brain-that-couldnt-remember.html Fight over the ownership of HM’s highlights issues in consent HT @FearLoathingBTX

A Code for Autism | Proto Magazine

Sunday, December 17th, 2017

http://protomag.com/articles/code-autism

Thoughts on the PsychENCODE workshop & Psychiatric Genomics in the Era of Team Science – 2 recent DC meetings on Neurogenomics

Tuesday, July 11th, 2017

https://linkstream2.gerstein.info/tag/i0pec17/

Coexpression networks implicate human midfetal deep cortical projection neurons in the pathogenesis of autism. – PubMed – NCBI

Monday, July 10th, 2017

https://www.ncbi.nlm.nih.gov/pubmed/24267886

Cell. 2013 Nov 21;155(5):997-1007. doi: 10.1016/j.cell.2013.10.020.

Coexpression networks implicate human midfetal deep cortical projection neurons in the pathogenesis of autism.

Willsey AJ1, Sanders SJ, Li M, Dong S, Tebbenkamp AT, Muhle RA, Reilly SK, Lin L, Fertuzinhos S, Miller JA, Murtha MT, Bichsel C, Niu W, Cotney J, Ercan-Sencicek AG, Gockley J, Gupta AR, Han W, He X, Hoffman EJ, Klei L, Lei J, Liu W, Liu L, Lu C, Xu X, Zhu Y, Mane SM, Lein ES, Wei L, Noonan JP, Roeder K, Devlin B, Sestan N, State MW.

Using brainspan to see where ASD genes are enriched in certain developmental times