linkstream2 microblog

https://www.k12schoolsupplies.net/Read-Light-Up-Your-Imagination-Argus-Large-Poster-p/t-a67365.htm

https://www.nature.com/articles/nature25980

A single-cell RNA-seq survey of the developmental landscape of the human prefrontal cortex

Suijuan Zhong
, Shu Zhang
[…]
Xiaoqun Wang
Nature
doi:10.1038/nature25980

Brain #transcriptome diversity at the single cell level
http://www.PNAS.org/content/112/23/7285 Has useful gene-exp. profiles of specific neural cell types

has profiles for 185 biomarker genes for 6 cell types

https://bioconductor.org/packages/release/bioc/html/variancePartition.html

new tool in psychencode meeting

A solution to a perennial problem: Co-first “author ordering determined by coin flip” – eg
http://onlinelibrary.wiley.com/wol1/doi/10.1002/anie.201604431/full & https://arxiv.org/pdf/1412.6980v8.pdf

similar
https://arxiv.org/pdf/1412.6980v8.pdf
∗Equal contribution. Author ordering determined by coin flip over a Google Hangout.

#Singlecell ChIPseq reveals…subpopulations defined by chromatin statehttp://www.nature.com/nbt/journal/vaop/ncurrent/full/nbt.3383.html Sparse data: on order of 1K uniq. reads/cell

http://www.nature.com/nbt/journal/vaop/ncurrent/full/nbt.3383.html

http://www.annualreviews.org/doi/abs/10.1146/annurev-genom-090413-025448

#Publication delays at PLOS & 3,475 other[s] by @dhimmel http://blog.dhimmel.com/plos-and-publishing-delays Perhaps journals should provide on-time stats as airlines do

paper from RECOMB 2014 might be interesting to you, which uses
hitting time in random walk to identify cancer drivers.

http://link.springer.com/chapter/10.1007%2F978-3-319-05269-4_23

HIT.nDRIVE: Multi-Driver Gene Prioritization based on Hitting Time

Raunak Shrestha, Ermin Hodzic, Jake Yeung, Kendric Wang, Thomas
Sauerwald, Phuong Dao, Shawn Anderson, Himisha Beltran, Mark A. Rubin,
Colin Collins, Gholamreza Haffari and S. Cenk Sahinalp.