Archive for March, 2016

AlgoRun, a Docker-based packaging system for platform-agnostic implemented algorithms

Saturday, March 19th, 2016

http://dx.doi.org/10.1093/bioinformatics/btw120

http://AlgoRun.org, #Docker-based packaging [w/ web GUI & workflow mgt] for platform-agnostic implement[ations]
http://Bioinformatics.Oxfordjournals.org/content/early/2016/03/02/bioinformatics.btw120

Hosny, A. et al. AlgoRun, a Docker-based packaging system for platform-agnostic implemented algorithms. Bioinformatics Advance Access, Mar 2, 2016.

Methane Has Never Looked So Beautiful – NYTimes.com

Saturday, March 19th, 2016

Methane Has Never Looked So Beautiful
http://NYTimes.com/2016/03/08/science/methane-has-never-looked-so-beautiful.html Me bubbling up in frozen lakes. Great #photos but ominous for #climatechange

SF424 (R&R) Application and Electronic Submission Information for NIH

Saturday, March 19th, 2016

More thoughts on this. One person’s condensed summary of this for Word:

QT:{{
Margins: 0.5 inches all around
Normal: Arial 11 pt
Spacing: 12 pt exactly (except for in-line figures, then automatic ‘single spacing’)
Hyphenate! (Menu: Page Layout, Page Setup, Hyphenation, Automatic) **** Legends: Arial 8.5 pt, Spacing exactly 8.4 pt. Hyphenated. **** Titles: Cambria 12 pt looks nice, but flexible.
References: NIH Style EndNote. [1]

NIH instructions write: “Use an Arial, Helvetica, Palatino Linotype, or Georgia typeface, a black font color, and a font size of 11 points or larger. (A Symbol font may be used to insert Greek letters or special characters; the font size requirement still applies.). Type density, including characters and spaces, must be no more than 15 characters per inch. Type may be no more than six lines per inch (1 inch = 72 points, six lines/inch = 12 pt exact spacing). Use standard paper size (8 ½” x 11) . Use at least one-half inch margins (top, bottom, left, and right) for all pages. No information should appear in the margins.”
“}}

QT:{{”

11. Descriptive Title of Applicant’s Project

Enter a brief descriptive title of the project. This field is required.

A “new” application must have a different title from any other PHS project with the same PD/PI. A “resubmission” or “renewal” application should normally have the same title as the previous grant or application. If the specific aims of the project have significantly changed, choose a new title.

A “revision” application must have the same title as the currently funded grant.

NIH and other PHS agencies limit title character length to 81 characters, including the spaces between words and punctuation. Titles in excess of 81 characters will be truncated. Be sure to only use standard characters in the descriptive title: A through Z, a through z, 0 through 9, space ( ), and underscore (_).

“}}

The above is OLD. Now you can go above 81 characters.

QT:{{”
Font

Prepare the application using Arial, Helvetica, Palatino Linotype, or Georgia typeface in black font color. After text attachments are converted to PDF, font size in each final PDF document must be at least 11 points (or larger). (A Symbol font may be used to insert Greek letters or special characters; the font size requirement still applies.) Since some PDF converters may reduce font sizes, it is important to confirm that type density in each final PDF document, including both characters and spaces, is no more than 15
characters+spaces per linear inch and no more than six lines per vertical inch.
“}}

Note: 72 points/inch so 6 lines/inch at 11pt type translates into a line spacing of 11 pts + 1pt per line.

QT:{{”
Paper Size and Page Margins

Final PDF documents should be formatted to be no larger than standard paper size (8 ½” x 11). The final PDF document should have at least one-half inch margins (top, bottom, left, and right) for all pages. No information should appear in the margins, including the PI’s name and page numbers.

….
Figures, Graphs, Diagrams, Charts, Tables, Figure Legends, and Footnotes You may use a smaller type size but it must be in a black font color, readily legible, and follow the font typeface requirement. Color can be used in figures; however, all text must be in a black font color, clear and legible.
“}}

http://grants.nih.gov/grants/funding/424

Target Heart Rates

Saturday, March 19th, 2016

Aiming for 85%*[220-age]

http://www.heart.org/HEARTORG/HealthyLiving/PhysicalActivity/FitnessBasics/Target-Heart-Rates_UCM_434341_Article.jsp#.Vu2dURIrKwQ

Take your pulse on the inside of your wrist, on the thumb side. Use the tips of your first two fingers (not your thumb) to press lightly over the blood vessels on your wrist.
Count your pulse for 10 seconds and multiply by 6 to find your beats per minute. You want to stay between 50 percent to 85 percent of your maximum heart rate. This range is your target heart rate.

This table shows estimated target heart rates for different ages. Your maximum heart rate is about 220 minus your age.

AgeTarget HR Zone 50-85% Average Maximum Heart Rate, 100%

35 years 93-157 beats per minute 185 beats per minute
40 years 90-153 beats per minute 180 beats per minute
45 years 88-149 beats per minute 175 beats per minute
50 years 85-145 beats per minute 170 beats per minute
55 years 83-140 beats per minute 165 beats per minute


If your heart rate is too high, you’re straining. So slow down. If it’s too low, and the intensity feels “light” or “moderate/brisk,” you may want to push yourself to exercise a little harder.

During the first few weeks of working out, aim for the lower ranger of your target zone (50 percent) and gradually build up to the higher range (85 percent). After six months or more, you may be able to exercise comfortably at up to 85 percent of your maximum heart rate.

All About Heart Rate (Pulse)

Saturday, March 19th, 2016

should be betw 60 & 100 but could be lower if you exercise
http://www.heart.org/HEARTORG/Conditions/More/MyHeartandStrokeNews/All-About-Heart-Rate-Pulse_UCM_438850_Article.jsp#.Vu2bLRIrKwQ

Understanding Blood Pressure Readings

Saturday, March 19th, 2016

want to stay below 120/80
http://www.heart.org/HEARTORG/Conditions/HighBloodPressure/AboutHighBloodPressure/Understanding-Blood-Pressure-Readings_UCM_301764_Article.jsp#.Vu2PdBIrKwQ

Twitter to Keep 140-Character Limit, CEO Says – Fortune

Saturday, March 19th, 2016

http://fortune.com/2016/03/19/twitter-keeps-140-character-limit/?platform=hootsuite

Top 4 Picasa Alternatives to Use | Beebom

Friday, March 18th, 2016

http://beebom.com/2016/02/picasa-alternatives

The man behind Flickr on making the service ‘awesome again’ | The Verge

Friday, March 18th, 2016

http://www.theverge.com/2013/3/20/4121574/flickr-chief-markus-spiering-talks-photos-and-marissa-mayer

What Makes Some People Sweat More Than Others? – WSJ

Friday, March 18th, 2016

http://www.wsj.com/articles/what-makes-some-people-sweat-more-than-others-1457971364?mod=e2tw