Posts Tagged ‘from’

Regexr

Saturday, September 6th, 2014

Nice website for learning/testing regular expressions:

http://www.regexr.com/

how to get full path of a unix file

Saturday, September 6th, 2014

ON MAC:

1. Drag the file from finder to a terminal. Yes, pull it out with some effort and just drop it right there…

2. The full path will magically show up in no time!

ON LINUX

http://stackoverflow.com/questions/5265702/how-to-get-full-path-of-a-file According to Stackoverflow, you should do:

readlink -f file.txt

ON BOTH:

find $PWD -iname “*” -maxdepth 1

find $PWD -maxdepth 1

Constructing structural networks of signaling pathways on the proteome scale

Saturday, September 6th, 2014

Structural networks of signaling pathways
http://www.sciencedirect.com/science/article/pii/S0959440X1200070X Prism on IL10 #networks, mapping on Cosmic, disrupting mutations as drivers

markov logic network from KDD 2014, might be good for netessay

Sunday, August 31st, 2014

[[DW: very large-scale models (vs. VLSI): markov logic network on customer networks, Innovation Award Talk by Pedro Domingos, KDD 2014 ]]

http://homes.cs.washington.edu/~pedrod/803

also, it has biological applications like:
Markov Logic Networks in the Analysis of Genetic Data
https://www.systemsbiology.org/markov-logic-networks-analysis-genetic-data

Dr Fenyo in NYU Proteomic talks

Sunday, August 31st, 2014

http://www.fenyolab.org/presentations/presentations.html
https://www.youtube.com/watch?v=wviPWfF5bdw

Calendar exporter

Thursday, August 14th, 2014

calendar exporter:

http://www.gcal2excel.com/

It is simple but does the work you need: calendar exporting, event filter based on keywords and simple statistics.

Genome-scale functional characterization of Drosophila developmental enhancers in vivo : Nature : Nature Publishing Group

Wednesday, August 13th, 2014

Functional characterization of… developmental #enhancers in vivo: 3.5k of 7.7k tested active in fly embryo stages
http://www.nature.com/nature/journal/v512/n7512/abs/nature13395.html

photos!

Sunday, August 10th, 2014

Images collected a year ago in Burma. This country has only just opened up to the outside world (read: no McDonald’s yet). A selection of the photos were published with a short photo-essay in
Newsweek/DailyBeast.

http://rippidan.wix.com/rippiphoto#!burma/cs50

http://www.thedailybeast.com/galleries/2013/09/24/on-the-cusp-of-change-a-trip-through-burma-photos.html

Navdy

Saturday, August 9th, 2014

http://www.navdy.com/

Single-Cell RNA-Seq Reveals Dynamic, Random Monoallelic Gene Expression in Mammalian Cells

Saturday, August 9th, 2014

QT:{{”
We discovered abundant (12 to 24%) monoallelic expression of autosomal genes and that expression of the two alleles occurs independently. The monoallelic expression appeared random and dynamic because there was considerable variation among closely related embryonic cells. “}}