Posts Tagged ‘dataset’

GIANT consortium data files – Giant Consortium

Saturday, October 12th, 2019

GIANT consortium data files – Giant Consortium

Whole-genome sequencing and comprehensive molecular profiling identify new driver mutations in gastric cancer

Thursday, November 20th, 2014

Dataset of 100 freely available STAD T/N pairs

Kai Wang,
Siu Tsan Yuen,
Jiangchun Xu,
Siu Po Lee,
Helen H N Yan,
Stephanie T Shi,
Hoi Cheong Siu,
Shibing Deng,
Kent Man Chu,
Simon Law,
Kok Hoe Chan,
Annie S Y Chan,
Wai Yin Tsui,
Siu Lun Ho,
Anthony K W Chan,
Jonathan L K Man,
Valentina Foglizzo,
Man Kin Ng,
April S Chan,
Yick Pang Ching,
Grace H W Cheng,
Tao Xie,
Julio Fernandez,
Vivian S W Li,
Hans Clevers,
Paul A Rejto,
Mao Mao
& Suet Yi Leung

Nature Genetics 46, 573–582 (2014) doi:10.1038/ng.2983Received 01 August 2013 Accepted 18 April 2014 Published online 11 May 2014

GigaDB Dataset – DOI 10.5524/100034 – Hepatocellular carcinoma genomic data from the Asia Cancer Research Group.

Friday, March 28th, 2014

Looks like 88 freely available liver cancer genome datasets

HuRef sperm sequencing

Saturday, January 4th, 2014

huref on Solid

Saturday, January 4th, 2014

To demonstrate the promise of personalized genome analysis, the genome of HuRef was sequenced using the Life SOLiDâ„¢ platform. Nimbus Informatics performed the analytical work for this project and has made the resulting data available here, running entirely on the Amazon Cloud.

Dissecting the genomic complexity underlying medulloblastoma : Nature : Nature Publishing Group

Wednesday, September 26th, 2012
Appears there’s germline variant calls (from JK) for potentially ~125 matched pairs