linkstream2 microblog

http://www.sciencemag.org/content/303/5657/537.long

Genome Research
http://genome.cshlp.org/content/23/6/941.full?rss=1
Appears to use much of the existing modencode data

http://www.cell.com/AJHG/abstract/S0002-9297(13)00223-1

Accounting for mutational heterogeneity in identifying cancer genes… MutSigCV by @broadinstitute via @notSoJunkDNA: http://bit.ly/14EPvVx http://www.nature.com/nature/journal/vaop/ncurrent/full/nature12213.html doi:10.1038/nature12213

http://www.nature.com/ng/journal/v45/n6/full/ng.2653.html

http://www.nature.com/ng/journal/vaop/ncurrent/full/ng.2658.html Uses only CG data for variation, only TFBS data form ENCODE. QT:”the binding sites of several transcription factors show clear evidence of adaptation.”

Integrated analysis of recurrent properties of cancer genes to identify novel drivers

http://genomebiology.com/2013/14/5/R52/abstract

http://www.nature.com/nature/journal/vaop/ncurrent/full/nature12171.html QT:”
Microbial sequencing of samples obtained from multiple skin sites in healthy human adults shows that core-body and arm sites are dominated by fungal species of the genus Malassezia, whereas foot sites show high fungal diversity, and that skin topography is associated with differential compositions of bacterial and fungal communities. “

http://www.nature.com/msb/journal/v8/n1/pdf/msb201234.pdf
Quantitative measurement of allele-specific protein expression in a diploid yeast hybrid by LC-MS

Baca et al
http://www.cell.com/abstract/S0092-8674%2813%2900343-7