Archive for the ‘PopSci’ Category

Wonder stuff: Seven new materials to change the world – New Scientist

Friday, October 31st, 2014

7 new materials to change the world http://www.newscientist.com/special/future-stuff #Chitin-based shrilk biodegradable plastic, Frozen-smoke #aerogel insulation

Candy Crush’s Puzzling Mathematics » American Scientist

Sunday, October 26th, 2014

Candy Crush’s Puzzling #Mathematics http://www.americanscientist.org/issues/id.16278,y.2014,no.6,content.true,page.1,css.print/issue.aspx Game reducible to a NP-hard logic circuit; maybe useful in solving other problems

QT:{{"
To show that Candy Crush is a mathematically hard problem, we could
reduce to it from any problem in NP. To make life simple, my
colleagues and I started from the granddaddy of all problems in NP,
finding a solution to a logical formula. This is called the
satisfiability problem. You will have solved such a problem if you
ever tackled a logic puzzle. You have to decide which propositions to
make true, and which to make false, to satisfy some set of logical
formulae: The Englishman lives in the red house. The Spaniard owns the
dog. The Norwegian lives next to the blue house. Should the
proposition that the Spaniard owns the zebra be made true or false?

To reduce a logic puzzle to a Candy Crush problem, we exploit the
close connection between logic and electrical circuits. Any logical
formula can simply be represented with an electrical circuit.
Computers are, after all, just a large collection of logic gates—ANDs,
ORs, and NOTs—with wires connecting them together. So all we need to
do is show that you could build an electrical circuit in a Candy Crush
game.

The idea of problem reduction offers an intriguing possibility for
Candy Crush addicts. Perhaps we can profit from the millions of hours
humans spend solving Candy Crush problems? By exploiting the idea of a
problem reduction, we could conceal some practical computational
problems within these puzzles. Other computational problems benefit
from such interactions: Every time you prove to a website that you’re
a person and not a bot by solving a CAPTCHA (one of those ubiquitous
distorted images of a word or number that you have to type in) the
answer helps Google digitize old books and newspapers. Perhaps we
should put Candy Crush puzzles to similar good uses.

"}}

Fighting a One-of-a-Kind Disease

Friday, October 24th, 2014

http://www.newyorker.com/magazine/2014/07/21/one-of-a-kind-2

The go-between: Life’s unexpected messenger – life – 15 September 2014 – New Scientist

Friday, October 3rd, 2014

The go-between: Life’s unexpected
messengerhttp://www.newscientist.com/article/mg22329860.400-the-gobetween-lifes-unexpected-messenger.html Overview connecting many flavors of #RNA – ie RNAi, siRNA, miRNA & @exRNA

Some bits unclear though – in relation to boundaries betw. siRNA & exRNA

QT:{{”

The RNA in cells is far more mobile than we thought (Image: Renaud Vigourt)

Far from staying put, RNA – the less famous cousin of DNA – can roam far afield, carrying information to other cells in the body and even to other animals

UNDER the soil of the cornfield, the rootworm larvae emerge from their eggs and crawl in search of roots to munch on. But their mother chose the wrong field to lay her eggs in. There’s something special about the maize here – it’s armed with a smart weapon designed to target the rootworms.

As the larvae feed, this weapon is released from the plant and enters their gut cells. There it halts production of a vital protein by blocking one specific gene. In the hours that follow, this “gene silencing” weapon spreads to other cells in the larvae’s bodies. At first there is no …

“}}

Not a nutty idea

Friday, October 3rd, 2014

Not a nutty idea
http://www.economist.com/news/science-and-technology/21595404-it-may-be-possible-reduce-sensitivity-those-allergic-peanuts-not Eating a small amount of peanuts desensitizes one to a severe #allergy. #Health & #Diet

Century After Extinction, Passenger Pigeons Remain Iconic—And Scientists Hope to Bring Them Back

Saturday, September 20th, 2014

Century After #Extinction, Passenger #Pigeons Remain Iconic http://news.nationalgeographic.com/news/2014/08/140831-passenger-pigeon-martha-deextinction-dna-animals-species Incredible decline due to humans, from a billion to zero

Tiny, Vast Windows Into Human DNA – NYTimes.com

Saturday, September 6th, 2014

http://www.nytimes.com/2014/09/02/science/human-fly-worm-dna.html

Expanding ENCODE | The Scientist Magazine(R)

Sunday, August 31st, 2014

http://www.the-scientist.com//?articles.view/articleNo/40891/title/Expanding-ENCODE

Master of Missing Elements » American Scientist

Saturday, August 23rd, 2014

Master of Missing #Elements, Moseley
http://www.americanscientist.org/issues/feature/2014/5/master-of-missing-elements Xray spectra show charge not mass orders periodic table, fixing K-Ar reversal

Features: The vitamin-D debate

Tuesday, August 19th, 2014

Vitamin D: How much is enough? By @RajMukhop #IOM recommends 600 IU (21-29 ng/ml in blood) but some want >4k, IOM max
http://www.asbmb.org/asbmbtoday/201406/Features/VitaminD

By Rajendrani Mukhopadhyay

QT:{{”
Other experts disagree. They say that there is solid evidence to connect vitamin D only to bone health, on which the IOM based its recommendation in 2011. “There’s this view that vitamin D is a miracle hormone that does literally everything,” says J. Wesley Pike at the University of Wisconsin-Madison. “The fact of the matter is that’s just simply not true.”
“}}

cure all v just bone health?

QT:{{”
There are two types of vitamin D: vitamin D2 and vitamin D3. Vitamin D2 is generally found in fortified foods, such as milk and some other dairy products, cereals and orange juice. The few natural sources of vitamin D include shitake mushrooms and fatty fish, such as salmon, sardines and mackerel. Vitamin D3 is the product of sunshine. Ultraviolet light from the sun converts 7-dehydrocholesterol in the skin into previtamin D3. The previtamin D3 gets turned into vitamin D3.

But both forms of vitamin D need to be activated to work. Vitamin D2 and D3 get hydroxylated by a P450 enzyme in the liver to be turned into 25-hydroxyvitamin D. This prohormone binds to a protein in the blood called the serum vitamin D-binding protein. Clasped to its binding partner, the prohormone then travels through the blood circulation system for about two weeks. When the bound prohormone gets to the kidneys, an enzyme called CYP27B1 hydroxylase in the proximal tubular epithelial cells turns it into the active hormone
1α,25-dihydroxyvitamin D.

This active form of vitamin D has a fleeting existence in plasma. “}}

QT:{{”
The IOM report in 2011 stated that a level between 21 ng/mL and 29 ng/mL of 25-hydroxyvitamin D was considered to be sufficient for maximum bone health. This is the range being disputed between vitamin-D experts. Some believe we need a blood level of more than 30 ng/mL of 25-hydroxyvitamin D; others think the IOM committee behind the report got it right.

Ross says the only clinical outcome that the committee could see where vitamin D had a direct effect was bone health. The literature on that was more extensive and conclusive, so the committee used it to base its recommendation of a daily vitamin D intake of 600 IU.

Critics of the IOM report had other bones to pick. One was the question of sun exposure. Sun-driven production of vitamin D is the most effective source of the nutrient. In the summer, a white person can make 10,000 IU after spending 30 minutes in the early-afternoon sun without sunscreen…..She says the 600 IU recommended for vitamin D was made to maintain an adequate serum level of the vitamin even in the absence of sun “but knowing full well that, for many people, sun adds to that. Chances are their actual total exposure, considering both diet and sun, is actually higher.”

Meanwhile, experts point out that black people have different requirements for vitamin D and calcium; melanin absorbs UV light and interferes with its transmission into the skin, reducing the production of vitamin D. Also, black Americans tend to consume less dairy, which is usually fortified with vitamin D. As John Adams at the University of California, Los Angeles, explains, the first values for serum levels of vitamin D were established by studying white people. He says that, if we look at the U.S. population today, about 60 percent of the white population has a serum level of 25-hydroxyvitamin D of less than 30 ng/mL. “If you look at African-Americans who have a (25-hydroxyvitamin D) level less than 30 ng/mL,” says Adams, “it’s 95 percent of the population.”

The IOM report set the upper limit for taking vitamin D at 4,000 IU for adults and between 2,500 and 3,000 IU for children, based on their ages. Critics say the upper limit could have been higher. They point to a review that showedthat doses of vitamin D up to 10,000 IU were not toxic.

In the meantime, everyone is waiting to see the results from a large-scale randomized trial now happening under the purview of the National Institutes of Health. The agency is supporting a long-term study of daily intake of vitamin D3 pills of 2,000 IU. Spearheaded by JoAnn Manson and Julie Buring at Harvard University-affiliated Brigham and Women’s Hospital, the trial is called the vitamin D and omega-3 trial, from which various letters have been plucked to give the trial the name VITAL.
“}}

Related to this:
http://www.medscape.com/viewarticle/589256_8

QT:{{”
If the vitamin D blood test was 30 ng/ml (75 nmol/L) and a 40 ng/ml (100 nmol/L) level was desired, 1,000 IU (25 mcg) of vitamin D per day over several months should be taken to achieve a normal blood level or 40 ng/ml (100 nmol/L). Upon reaching the goal, most individuals need to supplement with 800 to 1,000 IU per day to maintain this level. “}}