Archive for October, 2016

Notes from recent nextgen seq. meeting in Boston & Genome workshop in DC

Tuesday, October 4th, 2016

TWEETS

https://storify.com/markgerstein/tweets-from-plos-comp-bio-editors-meeting-i0plos16.html (includes NextGen meeting too)

TAGGED ITEMS

https://linkstream2.gerstein.info/tag/i0ng16
https://linkstream2.gerstein.info/tag/i0cgds

TOP LINK

http://www.nextgenerationsequencingusa-congress.com/venue/2016-venue/

MY LECTURES

http://lectures.gersteinlab.org/summary/Evaluating-exome-variants-using-structures-n-allelic-activity–20161004-i0ng16/
http://lectures.gersteinlab.org/summary/Bullets-for-NHGRI-workshop-M-Gerstein–20160929-i0cgds/

=###=> LAST WEEK NOTES (bundled with this) <=###=

https://linkstream2.gerstein.info/2016/09/24/notes-from-meetings-last-week-the-plos-comp-bio-summit-the-icgcpcawg-meeting-i0pcawg16i0plos16/

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets — ScienceDi rect

Tuesday, October 4th, 2016

Gray cites Parallel Genome-wide Expression Profiling of Indiv. Cells
w. nL Droplets http://www.sciencedirect.com/science/article/pii/S0092867415005498 … Drop-seq via barcodes #ngsus16

Multi-Input RNAi-Based Logic Circuit for Identification of Specific Cancer Cells | Science

Tuesday, October 4th, 2016

Weiss cites RNAi-Based Logic Circuit for Identification of…Cancer Cells http://science.sciencemag.org/content/333/6047/1307 How to optimize via adding FFLs #NGSUS16

adding in FFL & FBL to get more selectivity

Up to $10000 credit on CGC

Monday, October 3rd, 2016

http://www.cancergenomicscloud.org/free-credits/

Routes | CTtransit – Connecticut DOT-owned bus service

Monday, October 3rd, 2016

J bus runs up & down Whitney

https://www.cttransit.com/routes

How to Get More Out of Office Conversations – WSJ

Monday, October 3rd, 2016

http://www.wsj.com/articles/how-to-get-more-out-of-office-conversations-1475460301?mod=e2tw

BlackBerry’s Rise and Fall in 10 Phones | WIRED

Sunday, October 2nd, 2016

#BlackBerry’s Rise & Fall in 10 Phones, an arc embodied in plastic https://www.Wired.com/2016/09/blackberrys-rise-fall-10-phones Would be alive now if Android switch done earlier

Prick up your ears | The Economist

Saturday, October 1st, 2016

http://www.economist.com/news/business/21707955-wireless-headphones-and-smart-speakers-herald-new-class-devices-prick-up-your-ears?fsrc=scn/tw/te/pe/ed/prickupyourears

To the N.F.L., 40 Winks Is as Vital as the 40-Yard Dash – The New York Times

Saturday, October 1st, 2016

http://www.nytimes.com/2016/10/02/sports/football/nfl-players-sleep.html?smid=tw-nytimes&smtyp=cur&_r=0

Integrated Systems Approach Identifies Genetic Nodes and Networks in Late-Onset Alzheimer’s Disease: Cell

Saturday, October 1st, 2016

Zhang, Bin, Chris Gaiteri, Liviu-Gabriel Bodea, Zhi Wang, Joshua McElwee, Alexei A. Podtelezhnikov, Chunsheng Zhang et al. "Integrated systems approach identifies genetic nodes and networks in late-onset Alzheimer’s disease." Cell 153, no. 3 (2013): 707-720.

Integrated systems approach identifies genetic…#networks in…Alzheimer’s http://www.Cell.com/cell/abstract/S0092-8674(13)00387-5 Determining causality from co-expression