Kevin Davies @KevinADavies2m
Cool article on data sharing, Celera and the Genome Wars by veteran @Sciencemagazine editor Barbara Jasny … #OpenAccess
DUX4 binding to #retroelements creates promoters that are active… Highlights #chipseq binding sites in #repeats
http://www.plosgenetics.org/article/info%3Adoi%2F10.1371%2Fjournal.pgen.1003947 http://www.ncbi.nlm.nih.gov/pubmed/?term=24278031
PLoS Genet. 2013 Nov;9(11):e1003947. doi:
10.1371/journal.pgen.1003947. Epub 2013 Nov 21.
DUX4 binding to retroelements creates promoters that are active in FSHD muscle and testis.
Young JM, Whiddon JL, Yao Z, Kasinathan B, Snider L, Geng LN, Balog J, Tawil R, van der Maarel SM, Tapscott SJ.
http://www.pnas.org/content/111/4/E455.long
“In particular, a well-powered RVAS (rare variant association study) should involve discovery sets with at least 25,000 cases, together with a substantial replication set.”
NYT recently ran an article as well:
http://www.nytimes.com/2014/04/08/business/cancer-analysis-tools-circumvent-biopsies.html
http://www.nature.com/nm/journal/v20/n4/abs/nm.3511.html
An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage
http://www.nature.com/nm/journal/vaop/ncurrent/abs/nm.3519.html
http://stm.sciencemag.org/content/6/224/224ra24
http://www.nejm.org/doi/full/10.1056/NEJMoa1213261
http://stm.sciencemag.org/content/4/162/162ra154.full
DIAGNOSTICS: Detection of Chromosomal Alterations in the Circulation of Cancer Patients with Whole-Genome Sequencing
we can play in meetings, and tell people we are working on cancer research.
http://scienceblog.cancerresearchuk.org/2014/02/04/download-our-revolutionary-mobile-game-to-help-speed-up-cancer-research
Works well with back rack + clips + water bottle holder. However, over-handlebar risk
http://www.trekbikes.com/us/en/bikes/road/fitness/fx/7_7_fx/ $2K
http://www.trekbikes.com/us/en/bikes/road/fitness/fx/7_5_fx/ $1K
more info on bikes:
https://delicious.com/mbgmbg/clust_trekbikes
MT @KirkDBorne @analyticbridge 18 Courses from Stanford, Wharton, Duke, Berkeley… #DataScience #Analytics http://bit.ly/1ixpizD #teaching
http://www.nature.com/ncomms/2014/140205/ncomms4216/full/ncomms4216.html Mentioned as a mechanism for “occasional presence of templated insertions.”