Looking for a tool to find fusion transcript — use Grep :)
The “Grep” Command But Not FusionMap, FusionFinder or ChimeraScan Captures the CIC-DUX4 Fusion Gene from Whole Transcriptome Sequencing Data on a Small Round Cell Tumor with t(4;19)(q35;q13)
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0099439