Archive for September, 2013

Human chimp increase in segmental duplications

Sunday, September 1st, 2013

QT:”
Our results suggest that the evolutionary properties of copy-number mutation differ significantly from other forms of genetic mutation and, in contrast to the hominid slowdown of single-base-pair mutations, there has been a genomic burst of duplication activity at this period during human evolution.

http://www.nature.com/nature/journal/v457/n7231/full/nature07744.html

This is a paper on increased rates of segmental duplications along the lineage to human and chimp.
This should have some implications for pseudogene numbers between organisms.

GEMINI: Integrative Exploration of Genetic Variation and Genome Annotations

Sunday, September 1st, 2013

no website, github + readthedocs distribution
http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1003153

Edmund de Waal Prepares for an Exhibition – NYTimes.com

Sunday, September 1st, 2013

http://www.nytimes.com/2013/09/01/arts/design/edmund-de-waal-prepares-for-an-exhibition.html

Cancer and personal ‘omics

Sunday, September 1st, 2013

http://nautil.us/issue/4/the-unlikely/an-unlikely-cure-signals-new-hope-for-cancer

Social media and French: Nous twitterons | The Economist

Sunday, September 1st, 2013

http://www.economist.com/news/europe/21583310-french-language-getting-battered-social-media-nous-twitterons

What does peer review mean when applied to computer code? | PLOS Biologue

Sunday, September 1st, 2013

Mozilla reviews @PLOSCompBiol code articles: What does peer review mean when applied to computer code
http://blogs.plos.org/biologue/2013/08/08/what-does-peer-review-mean-when-applied-to-computer-code MT @lindseeeeee
http://blogs.plos.org/biologue/2013/08/08/what-does-peer-review-mean-when-applied-to-computer-code/

Night Shift Belly » American Scientist

Sunday, September 1st, 2013

http://www.americanscientist.org/issues/pub/2013/5/night-shift-belly

Machine Learning Resources

Sunday, September 1st, 2013

Comprehensive list

http://www.sciencemag.org/site/feature/data/compsci/machine_learning.xhtml

UCI Machine Learning Repository

Sunday, September 1st, 2013

Useful collection of datasets
http://archive.ics.uci.edu/ml/

The Flavor Connection Interactive: Scientific American

Sunday, September 1st, 2013

http://www.scientificamerican.com/article.cfm?id=flavor-connection-taste-map-interactive