linkstream2 microblog

Spent a lot of June going to meetings, incl.

PCAWG Santa Cruz
ICSG2015 (with a sub-visit to Tel Aviv)
Festival of Genomics
RNA-Seq 2015 Boston

“Crowd-sourced” notebook of favorite tweets:

https://storify.com/markgerstein/favorite-tweets-from-june-conferences-incl-festiva

My tagged posts, mostly links to papers:

http://linkstream2.gerstein.info/tag/i0flg/
http://linkstream2.gerstein.info/tag/i0isgc/
http://linkstream2.gerstein.info/tag/i0rnaseq15/
http://linkstream2.gerstein.info/tag/i0pcawgsc/

Lectures I gave:

http://lectures.gersteinlab.org/summary/Interpreting-Transcriptome-in-terms-of-Regulome–20150625-i0rnaseq15/

http://lectures.gersteinlab.org/summary/SVs_n_Pseudogenes_Tricky_but_Crucial_Genomic_Features–20150623-i0flg/

http://lectures.gersteinlab.org/summary/Comparing-Transcriptomes-of-Distant-Org–20150610-i0isgc-tau/

http://lectures.gersteinlab.org/summary/3D-struct-to-interpret-networks-deep-sequencing–i0isgc-20150608/

NSF WORKSHOP: MASS SPECTROMETRY DATA TO KNOWLEDGE
NSF Headquarters Building – Meeting Room 375
4201 Wilson Blvd
Arlington, VA 22230

http://linkstream2.gerstein.info/tag/i0msbdata/

http://meetings.cshl.edu/meetings/2015/genome15.shtml
https://storify.com/markgerstein/favorite-tweets-from-bog15-i0bog15 http://linkstream2.gerstein.info/tag/i0bog15/

http://linkstream2.gerstein.info/tag/i01kgsv15/

AACR 2015
http://www.aacr.org/Meetings/Pages/MeetingDetail.aspx?EventItemID=25#.VT8JXa1Viko http://linkstream2.gerstein.info/tag/i0pcawg15/

ISEV/ERCC Education Day – ISEV – International Society for
Extracellular Vesicles
http://www.isevmeeting.org/isevercc-education-day.html
http://linkstream2.gerstein.info/tag/i0isev/

2015 Bio-IT World Conference & Expo
http://www.bio-itworldexpo.com/
http://linkstream2.gerstein.info/tag/i0bioit15/
http://lectures.gersteinlab.org/summary/Progressive-summarization-large-scale-data-interpret-cancer–20150423-i0bioIT15/

8th International Conference on Ethics in Biology, Engineering & Medicine (ICEBEM 2015)
http://www.downstate.edu/orthopaedics/bioethics/
http://lectures.gersteinlab.org/summary/Soc-n-Tech-Soln-to-Privacy-in-Personal-Genomics–20150424-i0icebem15/

Tweets for all of them
https://storify.com/markgerstein/favorite-tweets-from-bioit-15-aacr-15-and-isev-15-16

links: http://linkstream2.gerstein.info/tag/i0enc15

http://lectures.gersteinlab.org/summary/thoughts-on-ENCODE-annotations–final-i0enc15/

from NHGRI

QT:{{”

On March 10-11, 2015, NHGRI will sponsor the workshop -From Genome Function to Biomedical Insight: ENCODE and Beyond – at the Natcher Conference Center on the NIH main campus. Details of the meeting, including the agenda, can be found from the link below. This workshop will also be recorded and streamed live. Follow the link below to watch.
“}}

Link: http://www.genome.gov/27560819

My tagged items:
http://linkstream2.gerstein.info/tag/i0beyondenc

Private meeting materials:
http://archive.gersteinlab.org/meetings/s/2015/03.11/meeting-materials-i0beyondenc

https://storify.com/markgerstein/favorite-tweets-from-nips-2014

http://linkstream2.gerstein.info/tag/i0nips

http://lectures.gersteinlab.org/summary/App-MachineLearning-Comparing-Transcriptomes–20141213-i0nips/

http://mlcb.org/

http://nips.cc/Conferences/2014/Program/event.php?ID=4288

i0biods14 => #biodata14
i0pcawg14 => i0pcawg14+exrna

https://storify.com/markgerstein/favorite-tweets-from-biological-data-science-i0bio

http://linkstream2.gerstein.info/tag/i0pcawg14
http://linkstream2.gerstein.info/tag/i0biods14

http://lectures.gersteinlab.org/summary/nc-annotation-sect-from–PAWG-2-5-9-14_prep_for_Boston_mtg

http://lectures.gersteinlab.org/summary/Framework-to-prioritize-Regulatory-variants-Progressive-summarization-of-large-scale-data–20141108-i0biods14/

http://lectures.gersteinlab.org/summary/Overview_ENCODE_Elements–20141018-i0ashg14

http://lectures.gersteinlab.org/summary/SVs_n_Pgenes–20141019-i0ashg14+SV

http://archive.gersteinlab.org/meetings/s/2014/10.24/i0ashg14-talk-for-A-Frankish-on-Gencode

(Lab-only link to a ppt I gave, some with “audio” annotation.)

https://storify.com/markgerstein/favorite-tweets-from-ashg-14-ashg14-i0ashg14

http://linkstream2.gerstein.info/tag/i0ashg14