Archive for May, 2015
A Sweet App That Helps You Visualize Complex Rhythms | WIRED
Tuesday, May 5th, 2015What is it? · iobio
Monday, May 4th, 2015remills / SVelter — Bitbucket
Monday, May 4th, 2015Notes from JAX structural variation meeting
Monday, May 4th, 2015What is it? · iobio
Monday, May 4th, 2015Viz of datasets
remills / SVelter — Bitbucket
Monday, May 4th, 2015https://bitbucket.org/remills/svelter
predict bkpts & assess
BMC Genomics | Abstract | Assessing structural variation in a personal genome—towards a human reference d iploid genome
Monday, May 4th, 2015consensus method
Genome Biology | Full text | An integrative probabilistic model for identification of structural variation in sequencing data
Monday, May 4th, 2015QT:{{”
We introduce GASVPro, an algorithm combining both paired read and read depth signals into a probabilistic model that can analyze multiple alignments of reads.
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Characterization of structural variants with single molecule and hybrid sequencing approaches
Monday, May 4th, 2015QT:{{”
We present MultiBreak-SV, an algorithm to detect structural variants (SVs) from single molecule sequencing data, paired read sequencing data, or a combination of sequencing data from different platforms. “}}
uses pacbio
http://bioinformatics.oxfordjournals.org/content/30/24/3458.long