Archive for October, 2014

Phenotypic impact of genomic structural variation: insights from and for human disease : Abstract : Nature Reviews Genetics

Monday, October 13th, 2014

http://www.nature.com/nrg/journal/v14/n2/abs/nrg3373.html

MuSiC: identifying mutational significance in can… Genome Res. 2012 – PubMed – NCBI

Monday, October 13th, 2014

http://www.ncbi.nlm.nih.gov/pubmed/22759861

New Manhattan Tower Is Now the Tallest, if Not the Fairest, of Them All – NYTimes.com

Monday, October 13th, 2014

http://www.nytimes.com/2014/10/14/nyregion/432-park-avenue-tower-the-tallest-if-not-the-fairest-of-them-all.html?smid=tw-nytimes&_r=0

Mercedes Is Making a Self-Driving Semi to Change the Future of Shipping | WIRED

Monday, October 13th, 2014

Mercedes Is Making a Self-#Driving Semi to Change the Future of
Shipping http://www.wired.com/2014/10/mercedes-making-self-driving-semi-change-future-shipping Autopilots will be safer truck drivers!

A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium : Nature Biotechnology : Nature Publishing Group

Monday, October 13th, 2014

Comprehensive assessment of #RNAseq… by #SEQC http://www.nature.com/nbt/journal/v32/n9/full/nbt.2957.html Spikeins as negative controls, so all diff expression results in FPs.

My public notes from Beyond the Genome 2014 (#BTGCG14,i0beyond)

Monday, October 13th, 2014

https://storify.com/markgerstein/tweets-related-to-beyond-the-genome-2014-i0beyond http://linkstream2.gerstein.info/tag/i0beyond/

Clonal evolution in breast cancer revealed by single nucleus genome sequencing : Nature : Nature Publishing Group

Monday, October 13th, 2014

http://www.nature.com/nature/journal/v512/n7513/full/nature13600.html

Realizing the promise of cancer predisposition genes : Nature : Nature Publishing Group

Monday, October 13th, 2014

Realizing the promise of cancer predisposition genes : Nature : Nature Publishing Group
http://www.nature.com/nature/journal/v505/n7483/full/nature12981.html

@markgerstein: .@rahman_nazneen mentions: Realizing the promise of cancer predisposition genes [of which there’s >100]
http://t.co/BbGNK6VJko #BTGCG14

Tracing the tumor lineage — ScienceDirect

Monday, October 13th, 2014

@markgerstein: Navin mentions: Tracing the tumor lineage
http://t.co/pDTQBxmd54 Has nice schematic showing different tumor progression models #BTGCG14

http://www.sciencedirect.com/science/article/pii/S1574789110000323?via=ihub

OncodriveCLUST: exploiting the positional clustering of somatic mutations to identify cancer genes

Monday, October 13th, 2014

@markgerstein: .nlbigas mentions: OncodriveCLUST: exploiting the [local] positional clustering of somatic mutations…
http://t.co/JbMYp6C7bF #BTGCG14

http://bioinformatics.oxfordjournals.org/content/29/18/2238.long