http://www.latimes.com/news/science/la-sci-dna-encode-20120906,0,7798745.story
Definitely plays junk DNA story a bit strong, with ENCODE “upending conventional wisdom”
Figure 1 in a recent Nature Genetics paper useful for LOF — saturation of LoF, essentially something that describes how many LoF variants we see as we keep adding more samples :
http://www.nature.com/ng/journal/v44/n6/full/ng.2303.html
QT:”
Basically, LoF variants are so enriched for ultra-rare variants that they show no sign of saturation, and the catalogue will continue to grow as more and more exomes are sequenced.
“
Dumt & Farligt – Phantom Flex Highlights – 1080p
The Open Science Data Cloud hosts a number of large data collections that seem likely to be of significant interest to Yale genomics researchers. The current public data collections are described at http://www.opensciencedatacloud.org/publicdata .
If you are interested in joining Kbase development, here is good a start site. http://kbase.us/developer-zone/
QT:
“igraph is a free software package for creating and manipulating undirected and directed graphs. It includes implementations for classic graph theory problems like minimum spanning trees and network flow, and also implements algorithms for some recent network analysis methods, like community structure search.
”
http://igraph.sourceforge.net/
particularly relevant to genomics
http://www.nature.com/naturejobs/science/articles/10.1038/nj7417-591a